EnhancerDB
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Enhancers that have rs12944781[chr17:39808179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs12944781[chr17:39808179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39807813 39808473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758044
chr17 39807813 39808473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259200
chr17 39807818 39808274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758045
chr17 39807818 39808274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259201
chr17 39807892 39808182 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758046
chr17 39807892 39808182 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259202
chr17 39808041 39808267 ZNF274 GTRD no Blood (GM12878) 108259203
chr17 39808163 39808183 TP63 JASPAR yes 54268620
chr17 39808170 39808190 RREB1 JASPAR yes 54268621
chr17 39808171 39808191 RREB1 JASPAR yes 54268622
chr17 39808173 39808193 RREB1 JASPAR yes 54268623
chr17 39808175 39808195 RREB1 JASPAR yes 54268624
chr17 39808177 39808197 RREB1 JASPAR yes 54268625
chr17 39808178 39808198 RREB1 JASPAR yes 54268626
chr17 39808179 39808199 RREB1 JASPAR yes 54268627
Genes associated with rs12944781[chr17:39808179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More