EnhancerDB
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  3. rs12945570[chr17:42870071]
Enhancers that have rs12945570[chr17:42870071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42867613 42875555 enh17184
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs12945570[chr17:42870071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42870065 42870077 IRF1 JASPAR yes 54414046
chr17 42870065 42870080 FOXP1 JASPAR yes 54414047
chr17 42870065 42870086 IRF1 JASPAR yes 54414048
chr17 42870067 42870087 RREB1 JASPAR yes 54414049
chr17 42870070 42870082 IRF1 JASPAR yes 54414050
chr17 42870070 42870085 FOXP1 JASPAR yes 54414051
chr17 42870070 42870091 IRF1 JASPAR yes 54414052
Genes associated with rs12945570[chr17:42870071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More