EnhancerDB
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  3. rs12947275[chr17:2865819]
Enhancers that have rs12947275[chr17:2865819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12947275[chr17:2865819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2865815 2865828 ZBTB18 JASPAR yes 52790371
chr17 2865817 2865827 ID4 JASPAR yes 52790372
chr17 2865817 2865827 TCF3 JASPAR yes 52790373
chr17 2865817 2865827 TCF4 JASPAR yes 52790374
chr17 2865819 2865828 ZEB1 JASPAR yes 52790375
chr17 2865819 2865829 TBX21 JASPAR yes 52790376
chr17 2865819 2865830 TBX20 JASPAR yes 52790377
chr17 2865819 2865830 TBX2 JASPAR yes 52790378
chr17 2865819 2865832 EOMES JASPAR yes 52790379
Genes associated with rs12947275[chr17:2865819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More