EnhancerDB
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  3. rs12948418[chr17:62978912]
Enhancers that have rs12948418[chr17:62978912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12948418[chr17:62978912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62978907 62978922 HNF4A JASPAR yes 55335035
chr17 62978908 62978922 RXRB JASPAR yes 55335036
chr17 62978908 62978922 RXRG JASPAR yes 55335037
chr17 62978908 62978923 HNF4G JASPAR yes 55335038
chr17 62978908 62978923 NR2C2 JASPAR yes 55335039
Genes associated with rs12948418[chr17:62978912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More