EnhancerDB
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  3. rs12950128[chr17:71288029]
Enhancers that have rs12950128[chr17:71288029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71282705 71302156 enh17360
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 71287045 71288497 vista715
VISTA
Transcript factors that have rs12950128[chr17:71288029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71287405 71288055 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21786069
chr17 71287405 71288055 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107689360
chr17 71287405 71288055 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108290929
chr17 71287606 71288050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21786085
chr17 71287606 71288050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107689385
chr17 71287606 71288050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108290954
chr17 71287675 71288283 ZNF143 GTRD no Epithelial (MCF-7) 107689400
chr17 71287675 71288283 ZNF143 GTRD no Epithelial (MCF-7) 108290969
chr17 71287746 71288030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21786101
chr17 71287746 71288030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107689406
chr17 71287746 71288030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108290975
chr17 71288021 71288039 ESR1 JASPAR yes 19282
chr17 71288021 71288039 ESR2 JASPAR yes 19283
chr17 71288021 71288039 ESR1 JASPAR yes 55858803
chr17 71288021 71288039 ESR2 JASPAR yes 55858804
chr17 71288023 71288038 ESR2 JASPAR yes 19285
chr17 71288023 71288038 ESR2 JASPAR yes 55858806
chr17 71288024 71288039 RFX5 JASPAR yes 19287
chr17 71288024 71288039 RFX5 JASPAR yes 55858808
Genes associated with rs12950128[chr17:71288029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More