EnhancerDB
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  3. rs12950579[chr17:2855602]
Enhancers that have rs12950579[chr17:2855602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12950579[chr17:2855602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2855601 2855610 CDX1 JASPAR yes 52788947
chr17 2855601 2855612 CDX2 JASPAR yes 52788948
Genes associated with rs12950579[chr17:2855602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More