EnhancerDB
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  3. rs12952908[chr17:41539865]
Enhancers that have rs12952908[chr17:41539865]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41539589 41549375 enh17170
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs12952908[chr17:41539865]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41538716 41539873 ZNF143 GTRD no Epithelial (MCF-7) 21760849
chr17 41538947 41539941 ZNF143 GTRD no Epithelial (MCF-7) 21760851
chr17 41538992 41539868 AR GTRD no Prostate (PC-3) 21760855
chr17 41538992 41539868 AR GTRD no Prostate (PC-3) 21760856
chr17 41539849 41539869 RREB1 JASPAR yes 54350284
chr17 41539850 41539871 ZNF263 JASPAR yes 54350285
chr17 41539851 41539871 RREB1 JASPAR yes 54350287
chr17 41539852 41539872 RREB1 JASPAR yes 54350288
chr17 41539855 41539875 RREB1 JASPAR yes 54350289
chr17 41539858 41539872 PLAG1 JASPAR yes 54350290
chr17 41539859 41539879 RREB1 JASPAR yes 54350291
chr17 41539860 41539880 RREB1 JASPAR yes 54350292
chr17 41539863 41539883 RREB1 JASPAR yes 54350293
Genes associated with rs12952908[chr17:41539865], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More