EnhancerDB
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  3. rs12955498[chr18:55448601]
Enhancers that have rs12955498[chr18:55448601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12955498[chr18:55448601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55448075 55448665 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337925
chr18 55448593 55448603 NFIA JASPAR yes 110885148
chr18 55448594 55448603 NFIX JASPAR yes 110885149
chr18 55448595 55448601 NFIC JASPAR yes 110885150
chr18 55448600 55448616 SOX8 JASPAR yes 110885151
Genes associated with rs12955498[chr18:55448601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More