EnhancerDB
  1. Home
  2. SNP
  3. rs12974343[chr19:2545157]
Enhancers that have rs12974343[chr19:2545157]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12974343[chr19:2545157]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2543148 2545171 TCF7L2 GTRD no Colon (HCT116) 21836768
chr19 2543148 2545171 TCF7L2 GTRD no Colon (HCT116) 108361876
chr19 2543148 2545171 TCF7L2 GTRD no Colon (HCT116) 108361877
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361878
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361879
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361880
chr19 2543215 2545558 ZNF274 GTRD no Blood (GM12878) 108361911
chr19 2543215 2545558 ZNF274 GTRD no Blood (GM12878) 108361912
chr19 2543231 2545646 ZNF274 GTRD no Blood (GM12878) 108361915
chr19 2543231 2545646 ZNF274 GTRD no Blood (GM12878) 108361916
chr19 2543231 2545646 ZNF274 GTRD no Blood (GM12878) 108361917
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361965
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361966
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361967
chr19 2543339 2545657 ZNF274 GTRD no Blood (GM12878) 108361993
chr19 2543339 2545657 ZNF274 GTRD no Blood (GM12878) 108361994
chr19 2543339 2545657 ZNF274 GTRD no Blood (GM12878) 108361995
chr19 2544229 2545167 TCF7L2 GTRD no Colon (HCT116) 21837064
chr19 2544229 2545167 TCF7L2 GTRD no Colon (HCT116) 108362360
chr19 2545153 2545168 TFAP2A JASPAR yes 112072522
chr19 2545153 2545168 TFAP2C JASPAR yes 112072523
chr19 2545155 2545169 EBF1 JASPAR yes 112072524
chr19 2545156 2545167 EBF1 JASPAR yes 112072525
chr19 2545156 2545168 TFAP2A JASPAR yes 112072526
chr19 2545156 2545168 TFAP2B JASPAR yes 112072527
chr19 2545156 2545168 TFAP2C JASPAR yes 112072528
chr19 2545156 2545170 EBF1 JASPAR yes 112072529
Genes associated with rs12974343[chr19:2545157], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More