EnhancerDB
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  3. rs12975509[chr19:13273358]
Enhancers that have rs12975509[chr19:13273358]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12975509[chr19:13273358]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13273159 13273763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850877
chr19 13273159 13273763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389189
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389190
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389191
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389192
chr19 13273301 13273805 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108389193
chr19 13273317 13273753 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108389194
chr19 13273331 13273939 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850878
chr19 13273331 13273939 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389195
chr19 13273346 13273892 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21850879
chr19 13273346 13273892 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108389196
chr19 13273358 13273674 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21850880
chr19 13273358 13273674 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108389197
Genes associated with rs12975509[chr19:13273358], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More