EnhancerDB
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  3. rs12983090[chr19:2522673]
Enhancers that have rs12983090[chr19:2522673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12983090[chr19:2522673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2522669 2522679 ELK1 JASPAR yes 112068653
chr19 2522669 2522681 EHF JASPAR yes 112068654
chr19 2522669 2522681 ELF4 JASPAR yes 112068655
chr19 2522669 2522682 ELF3 JASPAR yes 112068656
chr19 2522670 2522681 ELF5 JASPAR yes 112068657
chr19 2522671 2522681 GABPA JASPAR yes 112068658
chr19 2522673 2522679 ETS1 JASPAR yes 112068659
chr19 2522673 2522679 SPI1 JASPAR yes 112068660
Genes associated with rs12983090[chr19:2522673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More