EnhancerDB
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  3. rs13004623[chr2:228286186]
Enhancers that have rs13004623[chr2:228286186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13004623[chr2:228286186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228286175 228286189 PLAG1 JASPAR yes 81521918
chr2 228286182 228286187 SP1 TRANSFAC yes 81521919
chr2 228286183 228286188 SP1 TRANSFAC yes 81521920
chr2 228286183 228286192 THAP1 JASPAR yes 81521921
chr2 228286186 228286190 LFA1 TRANSFAC yes 81521922
Genes associated with rs13004623[chr2:228286186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More