EnhancerDB
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  3. rs13009576[chr2:228269266]
Enhancers that have rs13009576[chr2:228269266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13009576[chr2:228269266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228269249 228269270 IRF1 JASPAR yes 81519475
chr2 228269250 228269271 IRF1 JASPAR yes 81519477
chr2 228269251 228269266 FOXP1 JASPAR yes 81519478
chr2 228269253 228269268 FOXP1 JASPAR yes 81519479
chr2 228269254 228269269 STAT2 JASPAR yes 81519480
chr2 228269255 228269270 FOXP1 JASPAR yes 81519481
chr2 228269255 228269276 IRF1 JASPAR yes 81519482
chr2 228269256 228269277 IRF1 JASPAR yes 81519483
chr2 228269257 228269269 FOXC2 JASPAR yes 81519484
chr2 228269257 228269277 RREB1 JASPAR yes 81519485
chr2 228269258 228269269 FOXP2 JASPAR yes 81519486
chr2 228269260 228269275 FOXP1 JASPAR yes 81519487
chr2 228269261 228269282 IRF1 JASPAR yes 81519488
chr2 228269262 228269277 FOXP1 JASPAR yes 81519489
chr2 228269262 228269282 RREB1 JASPAR yes 81519490
chr2 228269262 228269283 IRF1 JASPAR yes 81519491
chr2 228269266 228269281 STAT2 JASPAR yes 81519492
Genes associated with rs13009576[chr2:228269266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More