EnhancerDB
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  3. rs13015907[chr2:38940186]
Enhancers that have rs13015907[chr2:38940186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs13015907[chr2:38940186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38940177 38940189 PKNOX1 JASPAR yes 73168676
chr2 38940177 38940189 PKNOX2 JASPAR yes 73168677
chr2 38940177 38940189 TGIF2 JASPAR yes 73168678
chr2 38940178 38940188 ID4 JASPAR yes 73168679
chr2 38940179 38940188 SNAI2 JASPAR yes 73168680
chr2 38940180 38940199 REST JASPAR yes 73168682
chr2 38940183 38940187 NFE TRANSFAC yes 73168683
Genes associated with rs13015907[chr2:38940186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More