EnhancerDB
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  3. rs13079094[chr3:119882088]
Enhancers that have rs13079094[chr3:119882088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119860605 119883439 enh7479
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs13079094[chr3:119882088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119882074 119882089 HNF1A JASPAR yes 5198865
chr3 119882075 119882088 HNF1B JASPAR yes 5198867
chr3 119882076 119882088 HNF1B JASPAR yes 5198869
chr3 119882078 119882088 GSX1 JASPAR yes 5198871
chr3 119882078 119882088 GSX2 JASPAR yes 5198872
chr3 119882078 119882088 HOXA2 JASPAR yes 5198873
chr3 119882078 119882088 HOXB2 JASPAR yes 5198874
chr3 119882078 119882088 HOXB3 JASPAR yes 5198875
chr3 119882078 119882088 LHX2 JASPAR yes 5198876
chr3 119882078 119882088 MEOX1 JASPAR yes 5198877
chr3 119882078 119882088 MEOX2 JASPAR yes 5198878
chr3 119882078 119882088 NOTO JASPAR yes 5198879
Genes associated with rs13079094[chr3:119882088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More