EnhancerDB
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  3. rs1317997[chr12:52601282]
Enhancers that have rs1317997[chr12:52601282]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1317997[chr12:52601282]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52600790 52601632 TCF7L2 GTRD no Colon (HCT116) 21546663
chr12 52600806 52601322 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546664
chr12 52600832 52601362 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546665
chr12 52600892 52601554 TCF7L2 GTRD no Colon (HCT116) 21546666
chr12 52600914 52601614 TCF7L2 GTRD no Colon (HCT116) 21546667
chr12 52601000 52601620 TCF7L2 GTRD no Colon (HCT116) 21546668
chr12 52601101 52601291 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546669
chr12 52601221 52601871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546670
chr12 52601278 52601282 H1TF2 TRANSFAC yes 120927974
chr12 52601278 52601282 NFE TRANSFAC yes 120927975
chr12 52601278 52601282 SRF TRANSFAC yes 120927976
chr12 52601282 52601302 RREB1 JASPAR yes 120927977
Genes associated with rs1317997[chr12:52601282], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More