EnhancerDB
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  3. rs13205726[chr6:13458490]
Enhancers that have rs13205726[chr6:13458490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13451065 13468999 enh8964
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs13205726[chr6:13458490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13458481 13458491 GSC2 JASPAR yes 100034048
chr6 13458482 13458490 OTX1 JASPAR yes 100034049
chr6 13458482 13458490 OTX2 JASPAR yes 100034050
chr6 13458482 13458490 RHOXF1 JASPAR yes 100034051
chr6 13458482 13458491 PITX3 JASPAR yes 100034052
chr6 13458490 13458502 HES7 JASPAR yes 100034053
chr6 13458490 13458502 PKNOX1 JASPAR yes 100034054
chr6 13458490 13458502 PKNOX2 JASPAR yes 100034055
chr6 13458490 13458502 TGIF2 JASPAR yes 100034056
Genes associated with rs13205726[chr6:13458490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More