EnhancerDB
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  3. rs13213330[chr6:30730589]
Enhancers that have rs13213330[chr6:30730589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs13213330[chr6:30730589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30730585 30730600 FOXP1 JASPAR yes 101045878
chr6 30730586 30730601 FOXP1 JASPAR yes 101045879
chr6 30730586 30730607 IRF1 JASPAR yes 101045880
chr6 30730587 30730602 FOXP1 JASPAR yes 101045881
chr6 30730587 30730608 IRF1 JASPAR yes 101045882
chr6 30730588 30730603 FOXP1 JASPAR yes 101045883
chr6 30730588 30730609 IRF1 JASPAR yes 101045884
chr6 30730589 30730604 FOXP1 JASPAR yes 101045885
chr6 30730589 30730610 IRF1 JASPAR yes 101045886
Genes associated with rs13213330[chr6:30730589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More