EnhancerDB
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  3. rs13222938[chr7:105688642]
Enhancers that have rs13222938[chr7:105688642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 105686265 105718733 enh9968
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13222938[chr7:105688642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 105688628 105688642 PLAG1 JASPAR yes 16992214
chr7 105688628 105688644 ZNF143 JASPAR yes 16992215
chr7 105688638 105688648 RELA JASPAR yes 16992217
chr7 105688638 105688648 REL JASPAR yes 16992218
chr7 105688638 105688649 NFKB1 JASPAR yes 16992219
chr7 105688642 105688653 E2F6 JASPAR yes 16992220
Genes associated with rs13222938[chr7:105688642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More