EnhancerDB
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  3. rs13302988[chr1:203481921]
Enhancers that have rs13302988[chr1:203481921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs13302988[chr1:203481921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203479893 203481935 ZNF143 GTRD no Epithelial (MCF-7) 21369012
chr1 203481708 203482358 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369079
chr1 203481708 203482358 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858950
chr1 203481760 203482416 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21369080
chr1 203481760 203482416 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107858951
chr1 203481780 203482290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369081
chr1 203481780 203482290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858952
chr1 203481811 203482387 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107858953
chr1 203481855 203482395 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107858954
chr1 203481857 203482367 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369082
chr1 203481857 203482367 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858955
chr1 203481865 203482321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369083
chr1 203481865 203482321 E2F4 UCSC Txn Factor no Conserved 107858956
chr1 203481865 203482321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858957
chr1 203481877 203482261 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21369084
chr1 203481877 203482261 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107858958
chr1 203481877 203482366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369085
chr1 203481877 203482366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858959
chr1 203481877 203482417 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107858960
chr1 203481891 203482181 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369086
chr1 203481891 203482181 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858961
chr1 203481894 203482398 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369087
chr1 203481894 203482398 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858962
chr1 203481901 203482365 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369088
chr1 203481901 203482365 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858963
chr1 203481904 203482288 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369089
chr1 203481904 203482288 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858964
chr1 203481906 203482302 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107858965
chr1 203481907 203482287 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369090
chr1 203481907 203482287 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858966
chr1 203481910 203482270 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369091
chr1 203481910 203482270 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858967
chr1 203481912 203482368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369092
chr1 203481912 203482368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858968
chr1 203481914 203482284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369093
chr1 203481914 203482284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858969
chr1 203481915 203482271 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369094
chr1 203481915 203482271 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858970
chr1 203481916 203481921 TFAP2A TRANSFAC yes 34633894
chr1 203481916 203481922 MZF1 JASPAR yes 34633895
chr1 203481920 203482290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369095
chr1 203481920 203482290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858971
Genes associated with rs13302988[chr1:203481921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 203274619 203278730 + BTG2 ENSG00000159388.5 203274619 203191 Esophagus 0.207953 1737
chr1 204159469 204165614 - KISS1 ENSG00000170498.7 204165614 677548 Breast 0.174836 1749