EnhancerDB
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  3. rs13335878[chr16:29281267]
Enhancers that have rs13335878[chr16:29281267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs13335878[chr16:29281267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29281257 29281271 RXRB JASPAR yes 10256214
chr16 29281262 29281272 TBR1 JASPAR yes 10256216
chr16 29281262 29281273 TBX2 JASPAR yes 10256217
chr16 29281264 29281276 HES5 JASPAR yes 10256218
chr16 29281264 29281276 PKNOX1 JASPAR yes 10256219
chr16 29281264 29281276 PKNOX2 JASPAR yes 10256220
chr16 29281264 29281276 TGIF2 JASPAR yes 10256221
chr16 29281265 29281275 MYF6 JASPAR yes 10256222
Genes associated with rs13335878[chr16:29281267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More