EnhancerDB
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  3. rs13339618[chr16:85580716]
Enhancers that have rs13339618[chr16:85580716]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13339618[chr16:85580716]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85580040 85582876 ZNF143 GTRD no Epithelial (MCF-7) 21728618
chr16 85580050 85581468 TCF7L2 GTRD no Colon (HCT116) 21728619
chr16 85580264 85580734 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21728623
chr16 85580295 85581017 ZNF274 GTRD no Bone Marrow (K562) 21728624
chr16 85580440 85582297 ZNF274 GTRD no Bone Marrow (K562) 21728625
chr16 85580441 85581465 ZNF274 GTRD no Bone Marrow (K562) 21728626
chr16 85580708 85580722 PLAG1 JASPAR yes 12074814
chr16 85580716 85580724 TBX5 JASPAR yes 12074815
chr16 85580716 85580725 ZEB1 JASPAR yes 12074816
Genes associated with rs13339618[chr16:85580716], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More