EnhancerDB
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  3. rs13339626[chr16:85580755]
Enhancers that have rs13339626[chr16:85580755]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13339626[chr16:85580755]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85580040 85582876 ZNF143 GTRD no Epithelial (MCF-7) 21728618
chr16 85580050 85581468 TCF7L2 GTRD no Colon (HCT116) 21728619
chr16 85580295 85581017 ZNF274 GTRD no Bone Marrow (K562) 21728624
chr16 85580440 85582297 ZNF274 GTRD no Bone Marrow (K562) 21728625
chr16 85580441 85581465 ZNF274 GTRD no Bone Marrow (K562) 21728626
chr16 85580739 85582335 ZNF274 GTRD no Bone Marrow (K562) 21728627
chr16 85580744 85580759 TFAP2C JASPAR yes 12074824
chr16 85580746 85580758 TFAP2A JASPAR yes 12074825
chr16 85580746 85580758 TFAP2B JASPAR yes 12074826
chr16 85580746 85580758 TFAP2C JASPAR yes 12074827
chr16 85580747 85580758 TFAP2B JASPAR yes 12074828
chr16 85580747 85580758 TFAP2C JASPAR yes 12074829
Genes associated with rs13339626[chr16:85580755], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More