EnhancerDB
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  3. rs13375962[chr1:151919797]
Enhancers that have rs13375962[chr1:151919797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs13375962[chr1:151919797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151918595 151920024 ZNF274 GTRD no Cervix (HeLa-S3) 21338560
chr1 151918595 151920024 ZNF274 GTRD no Cervix (HeLa-S3) 107830078
chr1 151918595 151920024 ZNF274 GTRD no Cervix (HeLa-S3) 107830079
chr1 151918950 151919823 ZNF274 GTRD no Blood (GM12878) 21338580
chr1 151918950 151919823 ZNF274 GTRD no Blood (GM12878) 107830105
chr1 151918990 151919996 ZNF143 GTRD no Epithelial (MCF-7) 21338582
chr1 151918990 151919996 ZNF143 GTRD no Epithelial (MCF-7) 107830107
chr1 151919011 151922201 ZNF274 GTRD no Blood (GM12878) 21338583
chr1 151919011 151922201 ZNF274 GTRD no Blood (GM12878) 107830108
chr1 151919020 151919845 ZNF274 GTRD no Cervix (HeLa-S3) 21338585
chr1 151919020 151919845 ZNF274 GTRD no Cervix (HeLa-S3) 107830111
chr1 151919041 151919808 ZNF274 GTRD no Blood (GM12878) 21338587
chr1 151919041 151919808 ZNF274 GTRD no Blood (GM12878) 107830113
chr1 151919091 151919852 ZNF274 GTRD no Cervix (HeLa-S3) 21338592
chr1 151919091 151919852 ZNF274 GTRD no Cervix (HeLa-S3) 107830118
chr1 151919109 151919805 ZNF274 GTRD no Blood (GM12878) 21338594
chr1 151919109 151919805 ZNF274 GTRD no Blood (GM12878) 107830120
chr1 151919119 151919898 ZNF274 GTRD no Bone Marrow (K562) 21338595
chr1 151919119 151919898 ZNF274 GTRD no Bone Marrow (K562) 107830121
chr1 151919649 151919979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338609
chr1 151919655 151919995 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338610
chr1 151919684 151920004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338611
chr1 151919741 151920896 ZNF274 GTRD no Blood (GM12878) 21338612
chr1 151919766 151922146 ZNF274 GTRD no Bone Marrow (K562) 21338613
chr1 151919783 151919799 RFX2 JASPAR yes 32206375
chr1 151919783 151919799 RFX3 JASPAR yes 32206376
chr1 151919783 151919799 RFX5 JASPAR yes 32206377
chr1 151919785 151919799 TLX1 JASPAR yes 32206379
chr1 151919785 151919800 ESR2 JASPAR yes 32206380
chr1 151919786 151919800 TLX1 JASPAR yes 32206381
chr1 151919791 151919805 BATF3 JASPAR yes 32206382
chr1 151919797 151919801 YY1 TRANSFAC yes 32206383
Genes associated with rs13375962[chr1:151919797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More