EnhancerDB
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  3. rs1340872[chr1:225647987]
Enhancers that have rs1340872[chr1:225647987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1340872[chr1:225647987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225647972 225647993 ZNF263 JASPAR yes 35743197
chr1 225647979 225647996 RXRA JASPAR yes 35743198
chr1 225647981 225647989 MEIS3 JASPAR yes 35743199
Genes associated with rs1340872[chr1:225647987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More