EnhancerDB
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  3. rs1342152[chr1:212461169]
Enhancers that have rs1342152[chr1:212461169]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212456045 212470579 enh910
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Stomach
Transcript factors that have rs1342152[chr1:212461169]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212461164 212461174 GSX2 JASPAR yes 35118037
chr1 212461165 212461173 BSX JASPAR yes 35118038
chr1 212461165 212461175 HOXB13 JASPAR yes 35118039
chr1 212461165 212461175 HOXD13 JASPAR yes 35118040
chr1 212461167 212461171 YY1 TRANSFAC yes 35118041
Genes associated with rs1342152[chr1:212461169], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More