EnhancerDB
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  3. rs13425457[chr2:25530596]
Enhancers that have rs13425457[chr2:25530596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs13425457[chr2:25530596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25530586 25530600 GLIS2 JASPAR yes 72464550
chr2 25530586 25530600 GLIS3 JASPAR yes 72464551
chr2 25530586 25530600 ZIC1 JASPAR yes 72464552
chr2 25530586 25530601 ZIC3 JASPAR yes 72464553
chr2 25530586 25530601 ZIC4 JASPAR yes 72464554
chr2 25530589 25530605 ZNF143 JASPAR yes 72464555
Genes associated with rs13425457[chr2:25530596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More