EnhancerDB
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  3. rs13428070[chr2:228259316]
Enhancers that have rs13428070[chr2:228259316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs13428070[chr2:228259316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228259303 228259318 SCRT1 JASPAR yes 81517746
chr2 228259305 228259318 SCRT2 JASPAR yes 81517751
chr2 228259311 228259325 TLX1 JASPAR yes 81517753
chr2 228259312 228259326 TLX1 JASPAR yes 81517754
chr2 228259315 228259319 YY1 TRANSFAC yes 81517755
Genes associated with rs13428070[chr2:228259316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More