EnhancerDB
  1. Home
  2. SNP
  3. rs13431548[chr2:235592389]
Enhancers that have rs13431548[chr2:235592389]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235581405 235605475 enh19346
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs13431548[chr2:235592389]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235592388 235592398 ALX3 JASPAR yes 81898196
chr2 235592388 235592398 ESX1 JASPAR yes 81898197
chr2 235592388 235592398 GSX1 JASPAR yes 81898198
chr2 235592388 235592398 GSX2 JASPAR yes 81898199
chr2 235592388 235592398 LBX2 JASPAR yes 81898200
chr2 235592388 235592398 RAX JASPAR yes 81898201
chr2 235592389 235592397 BARX1 JASPAR yes 81898202
chr2 235592389 235592397 BSX JASPAR yes 81898203
chr2 235592389 235592397 DLX6 JASPAR yes 81898204
chr2 235592389 235592397 ISX JASPAR yes 81898205
chr2 235592389 235592397 LBX1 JASPAR yes 81898206
chr2 235592389 235592397 LHX9 JASPAR yes 81898207
chr2 235592389 235592397 MSX1 JASPAR yes 81898208
chr2 235592389 235592397 MSX2 JASPAR yes 81898209
chr2 235592389 235592397 NKX6-2 JASPAR yes 81898210
chr2 235592389 235592397 PRRX1 JASPAR yes 81898211
chr2 235592389 235592397 RAX2 JASPAR yes 81898212
chr2 235592389 235592397 SHOX JASPAR yes 81898213
chr2 235592389 235592397 UNCX JASPAR yes 81898214
chr2 235592389 235592403 POU1F1 JASPAR yes 81898215
Genes associated with rs13431548[chr2:235592389], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 236402733 237040444 + AGAP1 ENSG00000157985.13 236402733 810344 Esophagus 0.207473 3278