EnhancerDB
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  3. rs1350480[chr2:28185849]
Enhancers that have rs1350480[chr2:28185849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1350480[chr2:28185849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28185847 28185857 HOXA13 JASPAR yes 72603537
chr2 28185847 28185857 HOXB13 JASPAR yes 72603538
chr2 28185848 28185857 CDX1 JASPAR yes 72603539
chr2 28185848 28185859 CDX2 JASPAR yes 72603540
Genes associated with rs1350480[chr2:28185849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More