EnhancerDB
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  3. rs137949466[chr6:12347574]
Enhancers that have rs137949466[chr6:12347574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs137949466[chr6:12347574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12347555 12347574 PITX2 TRANSFAC yes 99963848
chr6 12347561 12347574 ZBTB18 JASPAR yes 99963849
chr6 12347562 12347574 PKNOX1 JASPAR yes 99963850
chr6 12347562 12347574 TGIF1 JASPAR yes 99963851
chr6 12347565 12347574 ZEB1 JASPAR yes 99963857
chr6 12347565 12347575 TBX21 JASPAR yes 99963858
chr6 12347566 12347574 MGA JASPAR yes 99963859
chr6 12347566 12347574 TBX15 JASPAR yes 99963860
chr6 12347566 12347574 TBX1 JASPAR yes 99963861
chr6 12347566 12347574 TBX4 JASPAR yes 99963862
chr6 12347566 12347574 TBX5 JASPAR yes 99963863
chr6 12347566 12347576 TBR1 JASPAR yes 99963864
chr6 12347566 12347579 SMAD2 JASPAR yes 99963865
Genes associated with rs137949466[chr6:12347574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More