EnhancerDB
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  3. rs138048273[chr1:185619911]
Enhancers that have rs138048273[chr1:185619911]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs138048273[chr1:185619911]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185619783 185620379 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21359472
chr1 185619901 185619916 HNF4A JASPAR yes 33830683
chr1 185619902 185619916 NR2F1 JASPAR yes 33830684
chr1 185619902 185619916 RXRB JASPAR yes 33830685
chr1 185619902 185619916 RXRG JASPAR yes 33830686
chr1 185619902 185619917 HNF4G JASPAR yes 33830687
Genes associated with rs138048273[chr1:185619911], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More