EnhancerDB
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  3. rs138054108[chr5:179195342]
Enhancers that have rs138054108[chr5:179195342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179185005 179195695 enh8908
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Blood (T-cell) Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Breast Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs138054108[chr5:179195342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179195333 179195342 PITX3 JASPAR yes 68189234
chr5 179195333 179195343 GSC2 JASPAR yes 68189235
chr5 179195333 179195343 GSC JASPAR yes 68189236
chr5 179195334 179195342 OTX1 JASPAR yes 68189237
Genes associated with rs138054108[chr5:179195342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More