EnhancerDB
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  3. rs138107325[chr12:125003230]
Enhancers that have rs138107325[chr12:125003230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138107325[chr12:125003230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125003139 125003643 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21580922
chr12 125003139 125003643 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108068800
chr12 125003214 125003230 RFX2 JASPAR yes 124387837
chr12 125003214 125003230 RFX3 JASPAR yes 124387838
chr12 125003214 125003230 RFX4 JASPAR yes 124387839
chr12 125003214 125003230 RFX5 JASPAR yes 124387840
chr12 125003215 125003234 RFX2 JASPAR yes 124387841
chr12 125003230 125003244 TLX1 JASPAR yes 124387843
Genes associated with rs138107325[chr12:125003230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More