EnhancerDB
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Enhancers that have rs1381467[chr1:225878329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1381467[chr1:225878329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225876718 225879499 AR GTRD no Prostate (PC-3) 21385240
chr1 225877120 225878468 ZNF143 GTRD no Epithelial (MCF-7) 21385241
chr1 225877202 225878391 ZNF143 GTRD no Epithelial (MCF-7) 21385244
chr1 225877214 225878396 ZNF274 GTRD no Cervix (HeLa-S3) 21385245
chr1 225877302 225878958 ZNF143 GTRD no Epithelial (MCF-7) 21385248
chr1 225877413 225879411 ZNF143 GTRD no Epithelial (MCF-7) 21385252
chr1 225877422 225878862 ZNF143 GTRD no Epithelial (MCF-7) 21385253
chr1 225877427 225879225 ZNF274 GTRD no Liver (HepG2) 21385254
chr1 225877429 225878693 ZNF274 GTRD no Liver (HepG2) 21385255
chr1 225877441 225878779 ZNF143 GTRD no Epithelial (MCF-7) 21385256
chr1 225877482 225879354 ZNF274 GTRD no Liver (HepG2) 21385259
chr1 225877526 225878822 ZNF274 GTRD no Liver (HepG2) 21385260
chr1 225877551 225878827 ZNF143 GTRD no Epithelial (MCF-7) 21385262
chr1 225877644 225878679 ZNF274 GTRD no Liver (HepG2) 21385270
chr1 225878046 225878756 ZNF274 GTRD no Liver (HepG2) 21385278
chr1 225878075 225878857 ZNF274 GTRD no Liver (HepG2) 21385279
chr1 225878113 225878869 ZNF274 GTRD no Liver (HepG2) 21385280
chr1 225878203 225878797 ZNF274 GTRD no Liver (HepG2) 21385281
chr1 225878208 225878637 ZNF143 GTRD no Epithelial (MCF-7) 21385282
chr1 225878240 225878738 ZNF143 GTRD no Epithelial (MCF-7) 21385283
chr1 225878256 225878713 ZNF274 GTRD no Liver (HepG2) 21385284
chr1 225878266 225878691 ZNF143 GTRD no Epithelial (MCF-7) 21385285
chr1 225878274 225878757 ZNF274 GTRD no Liver (HepG2) 21385286
chr1 225878277 225878608 ZNF143 GTRD no Epithelial (MCF-7) 21385287
chr1 225878289 225878673 ZNF143 GTRD no Epithelial (MCF-7) 21385288
chr1 225878301 225878810 ZNF143 GTRD no Epithelial (MCF-7) 21385289
chr1 225878320 225878329 SNAI2 JASPAR yes 35762114
chr1 225878320 225878330 ID4 JASPAR yes 35762115
chr1 225878320 225878330 TCF3 JASPAR yes 35762116
chr1 225878320 225878330 TCF4 JASPAR yes 35762117
chr1 225878322 225878331 ZEB1 JASPAR yes 35762118
chr1 225878322 225878660 ZNF143 GTRD no Epithelial (MCF-7) 21385290
Genes associated with rs1381467[chr1:225878329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More