EnhancerDB
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  3. rs138213490[chr17:62169136]
Enhancers that have rs138213490[chr17:62169136]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138213490[chr17:62169136]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62168419 62169170 P63 GTRD no Skin (Keratinocyte) 21778629
chr17 62168419 62169170 P63 GTRD no Skin (Keratinocyte) 108282245
chr17 62168763 62169409 ZNF143 GTRD no Epithelial (MCF-7) 21778633
chr17 62168763 62169409 ZNF143 GTRD no Epithelial (MCF-7) 108282258
chr17 62169081 62172052 ZNF143 GTRD no Epithelial (MCF-7) 21778634
chr17 62169081 62172052 ZNF143 GTRD no Epithelial (MCF-7) 108282259
chr17 62169129 62169136 SP1 TRANSFAC yes 55276520
chr17 62169129 62169139 SP1 JASPAR yes 55276521
chr17 62169131 62169136 SP1 TRANSFAC yes 55276522
Genes associated with rs138213490[chr17:62169136], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More