EnhancerDB
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  3. rs138228945[chr12:52538573]
Enhancers that have rs138228945[chr12:52538573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs138228945[chr12:52538573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52538139 52539820 ZBTB33 GTRD no Lung (A549) 108033090
chr12 52538170 52539881 ZBTB33 GTRD no Lung (A549) 108033091
chr12 52538502 52540289 ZNF143 GTRD no Epithelial (MCF-7) 21546353
chr12 52538502 52540289 ZNF143 GTRD no Epithelial (MCF-7) 108033092
chr12 52538502 52540289 ZNF143 GTRD no Epithelial (MCF-7) 108033093
chr12 52538559 52538580 ZNF263 JASPAR yes 120921484
chr12 52538562 52538579 RXRA JASPAR yes 120921485
chr12 52538565 52539638 ZNF143 GTRD no Epithelial (MCF-7) 21546354
chr12 52538565 52539638 ZNF143 GTRD no Epithelial (MCF-7) 108033094
Genes associated with rs138228945[chr12:52538573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More