EnhancerDB
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  3. rs138285079[chr2:23658055]
Enhancers that have rs138285079[chr2:23658055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 23632492 23662135 enh18338
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs138285079[chr2:23658055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 23658039 23658055 RFX2 JASPAR yes 72363523
chr2 23658039 23658055 RFX3 JASPAR yes 72363524
chr2 23658039 23658055 RFX4 JASPAR yes 72363525
chr2 23658039 23658055 RFX5 JASPAR yes 72363526
chr2 23658040 23658059 RFX2 JASPAR yes 72363527
chr2 23658048 23658058 SP1 JASPAR yes 72363528
Genes associated with rs138285079[chr2:23658055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More