EnhancerDB
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  3. rs138315759[chr1:19271804]
Enhancers that have rs138315759[chr1:19271804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138315759[chr1:19271804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19271677 19273824 TCF7L2 GTRD no Colon (HCT116) 107802286
chr1 19271798 19271808 SP1 JASPAR yes 27164581
chr1 19271799 19271815 GLIS1 JASPAR yes 27164582
chr1 19271800 19271810 ZNF740 JASPAR yes 27164583
chr1 19271800 19271814 GLIS2 JASPAR yes 27164584
chr1 19271800 19271814 GLIS3 JASPAR yes 27164585
Genes associated with rs138315759[chr1:19271804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More