EnhancerDB
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  3. rs138331948[chr1:201423876]
Enhancers that have rs138331948[chr1:201423876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138331948[chr1:201423876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201423236 201424441 ZNF143 GTRD no Epithelial (MCF-7) 21364048
chr1 201423568 201424474 ZNF143 GTRD no Epithelial (MCF-7) 21364049
chr1 201423578 201424279 ZNF143 GTRD no Epithelial (MCF-7) 21364050
chr1 201423586 201424428 ZNF143 GTRD no Epithelial (MCF-7) 21364051
chr1 201423669 201424027 ZNF274 GTRD no Cervix (HeLa-S3) 21364052
chr1 201423812 201424453 TCF7L2 GTRD no Colon (HCT116) 21364053
chr1 201423871 201423884 ELF1 JASPAR yes 34495367
chr1 201423873 201423884 ETV2 JASPAR yes 34495368
chr1 201423874 201423884 ERF JASPAR yes 34495369
chr1 201423874 201423884 ERG JASPAR yes 34495370
chr1 201423874 201423884 ETS1 JASPAR yes 34495371
chr1 201423874 201423884 FEV JASPAR yes 34495372
chr1 201423874 201423884 FLI1 JASPAR yes 34495373
chr1 201423874 201423885 ELK4 JASPAR yes 34495374
chr1 201423874 201423885 FLI1 JASPAR yes 34495375
chr1 201423875 201423883 FEV JASPAR yes 34495376
Genes associated with rs138331948[chr1:201423876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More