EnhancerDB
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  3. rs138340574[chr12:50909648]
Enhancers that have rs138340574[chr12:50909648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138340574[chr12:50909648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50909634 50909655 ZNF263 JASPAR yes 120836593
chr12 50909637 50909658 ZNF263 JASPAR yes 120836594
chr12 50909638 50909649 FLI1 JASPAR yes 120836595
chr12 50909638 50909651 ELF3 JASPAR yes 120836596
chr12 50909639 50909649 ETV6 JASPAR yes 120836597
chr12 50909639 50909650 ELF5 JASPAR yes 120836598
chr12 50909639 50909652 ELF1 JASPAR yes 120836599
chr12 50909640 50909648 EHF JASPAR yes 120836601
chr12 50909642 50909663 ZNF263 JASPAR yes 120836602
chr12 50909643 50909664 ZNF263 JASPAR yes 120836603
chr12 50909646 50909667 ZNF263 JASPAR yes 120836604
Genes associated with rs138340574[chr12:50909648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More