EnhancerDB
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Enhancers that have rs138377084[chr17:55977534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs138377084[chr17:55977534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55977048 55977618 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108274702
chr17 55977104 55977574 GATA3 UCSC Txn Factor no Conserved 108274703
chr17 55977104 55977574 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108274704
chr17 55977241 55977551 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108274707
chr17 55977259 55977643 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108274709
chr17 55977265 55977545 ELF1 UCSC Txn Factor no Conserved 108274711
chr17 55977267 55977545 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773833
chr17 55977267 55977545 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274712
chr17 55977448 55977787 ZNF143 GTRD no Epithelial (MCF-7) 108274715
chr17 55977528 55977538 MSC JASPAR yes 54996850
Genes associated with rs138377084[chr17:55977534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More