EnhancerDB
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  3. rs138405488[chr17:62982368]
Enhancers that have rs138405488[chr17:62982368]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 62981858 62982486 vista25541
VISTA
Transcript factors that have rs138405488[chr17:62982368]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62981700 62982467 ZNF143 GTRD no Epithelial (MCF-7) 21780747
chr17 62981700 62982467 ZNF143 GTRD no Epithelial (MCF-7) 108283154
chr17 62981710 62982481 ZNF143 GTRD no Epithelial (MCF-7) 21780749
chr17 62981710 62982481 ZNF143 GTRD no Epithelial (MCF-7) 108283156
chr17 62981786 62982509 ZNF143 GTRD no Epithelial (MCF-7) 21780751
chr17 62981786 62982509 ZNF143 GTRD no Epithelial (MCF-7) 108283158
chr17 62981844 62982380 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780755
chr17 62981844 62982380 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283162
chr17 62981846 62982374 ZNF143 GTRD no Epithelial (MCF-7) 21780756
chr17 62981846 62982374 ZNF143 GTRD no Epithelial (MCF-7) 108283163
chr17 62981930 62982506 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21780761
chr17 62981930 62982506 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108283168
chr17 62981933 62982547 ZNF274 GTRD no Cervix (HeLa-S3) 21780762
chr17 62981933 62982547 ZNF274 GTRD no Cervix (HeLa-S3) 108283169
chr17 62981933 62982547 ZNF274 GTRD no Cervix (HeLa-S3) 108283170
chr17 62981948 62982632 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780764
chr17 62981948 62982632 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283172
chr17 62981948 62982632 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283173
chr17 62981961 62982481 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780766
chr17 62981961 62982481 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283175
chr17 62981967 62982836 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780768
chr17 62981967 62982836 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283177
chr17 62981967 62982836 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283178
chr17 62981985 62982421 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780771
chr17 62981985 62982421 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283181
chr17 62982030 62982530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780774
chr17 62982030 62982530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283185
chr17 62982030 62982530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283186
chr17 62982041 62982431 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21780778
chr17 62982041 62982431 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108283190
chr17 62982071 62982695 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21780783
chr17 62982071 62982695 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108283195
chr17 62982071 62982695 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108283196
chr17 62982079 62982399 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780785
chr17 62982079 62982399 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283198
chr17 62982093 62982473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780787
chr17 62982093 62982473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283200
chr17 62982094 62982474 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780788
chr17 62982094 62982474 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283201
chr17 62982148 62982832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780789
chr17 62982148 62982832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283202
chr17 62982148 62982832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283203
chr17 62982293 62982729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780790
chr17 62982293 62982729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283204
chr17 62982293 62982729 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283205
chr17 62982301 62982737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780791
chr17 62982301 62982737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283206
chr17 62982301 62982737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283207
chr17 62982318 62982658 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780792
chr17 62982318 62982658 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283208
chr17 62982318 62982658 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283209
chr17 62982362 62982368 SOX10 JASPAR yes 21275044
chr17 62982362 62982368 SOX10 JASPAR yes 55335511
Genes associated with rs138405488[chr17:62982368], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More