EnhancerDB
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  3. rs138464743[chr17:75385330]
Enhancers that have rs138464743[chr17:75385330]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138464743[chr17:75385330]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 21790292
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 108298568
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 108298569
chr17 75384582 75385364 ZNF274 GTRD no Liver (HepG2) 21790297
chr17 75384582 75385364 ZNF274 GTRD no Liver (HepG2) 108298574
chr17 75384864 75385352 ZNF143 GTRD no Epithelial (MCF-7) 21790311
chr17 75384864 75385352 ZNF143 GTRD no Epithelial (MCF-7) 108298590
chr17 75385263 75385783 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21790313
chr17 75385263 75385783 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108298592
chr17 75385295 75385815 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21790314
chr17 75385295 75385815 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108298593
chr17 75385299 75385895 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21790315
chr17 75385299 75385895 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108298594
chr17 75385327 75385337 ERF JASPAR yes 56075961
chr17 75385327 75385337 ETV6 JASPAR yes 56075962
chr17 75385329 75385335 ETS1 JASPAR yes 56075963
chr17 75385329 75385335 SPI1 JASPAR yes 56075964
chr17 75385330 75385351 ZNF263 JASPAR yes 56075965
Genes associated with rs138464743[chr17:75385330], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 76352864 76356158 - SOCS3 ENSG00000184557.3 76356158 967534 Esophagus 0.249009 16310