EnhancerDB
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  3. rs138485853[chr1:116902406]
Enhancers that have rs138485853[chr1:116902406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116881229 116905675 enh581
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Thyroid Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs138485853[chr1:116902406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116901754 116902796 P63 GTRD no Skin (Keratinocyte) 21332323
chr1 116901758 116902567 P63 GTRD no Skin (Keratinocyte) 21332324
chr1 116901855 116902595 P63 GTRD no Skin (Keratinocyte) 21332325
chr1 116902014 116902598 P63 GTRD no Skin (Keratinocyte) 21332326
chr1 116902179 116902700 SOX2 GTRD no Neural Stem Cells (H9) 21332327
chr1 116902398 116902419 IRF1 JASPAR yes 31800653
chr1 116902400 116902415 PRDM1 JASPAR yes 31800654
Genes associated with rs138485853[chr1:116902406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More