EnhancerDB
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Enhancers that have rs138522959[chr18:57552960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57537325 57555285 enh17763
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
chr18 57552932 57553277 vista27651
VISTA
Transcript factors that have rs138522959[chr18:57552960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57552756 57552965 EBF1 UCSC Txn Factor no Conserved 108338763
chr18 57552762 57552965 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824747
chr18 57552762 57552965 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338764
chr18 57552769 57553453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824748
chr18 57552769 57553453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338765
chr18 57552779 57553439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824749
chr18 57552779 57553439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338766
chr18 57552839 57553435 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824750
chr18 57552839 57553435 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338767
chr18 57552842 57553472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824751
chr18 57552842 57553472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338768
chr18 57552886 57553360 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824752
chr18 57552886 57553360 NFIC UCSC Txn Factor no Conserved 108338769
chr18 57552886 57553360 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338770
chr18 57552897 57553417 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824753
chr18 57552897 57553417 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338771
chr18 57552898 57553296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824754
chr18 57552898 57553296 RUNX3 UCSC Txn Factor no Conserved 108338772
chr18 57552898 57553296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338773
chr18 57552898 57553342 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108338774
chr18 57552901 57553170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824755
chr18 57552901 57553170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338775
chr18 57552904 57553420 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824756
chr18 57552904 57553420 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338776
chr18 57552911 57553181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824757
chr18 57552911 57553181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338777
chr18 57552936 57553320 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824758
chr18 57552936 57553320 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338778
chr18 57552948 57553268 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824759
chr18 57552948 57553268 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338779
chr18 57552950 57553426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824760
chr18 57552950 57553426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338780
chr18 57552955 57553391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824761
chr18 57552955 57553391 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338781
chr18 57552958 57552968 SP1 JASPAR yes 42717125
chr18 57552958 57552968 SP1 JASPAR yes 111061502
chr18 57552960 57552970 MZF1 JASPAR yes 42717126
chr18 57552960 57552970 MZF1 JASPAR yes 111061503
chr18 57552960 57553270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824762
chr18 57552960 57553270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338782
chr18 57552960 57553300 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824763
chr18 57552960 57553300 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338783
Genes associated with rs138522959[chr18:57552960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More