EnhancerDB
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  3. rs138539277[chr15:39501855]
Enhancers that have rs138539277[chr15:39501855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39472205 39509375 enh16053
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs138539277[chr15:39501855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39501583 39503390 P63 GTRD no Skin (Keratinocyte) 21648261
chr15 39501583 39503489 P63 GTRD no Skin (Keratinocyte) 21648262
chr15 39501592 39502357 P63 GTRD no Skin (Keratinocyte) 21648263
chr15 39501592 39502507 P63 GTRD no Skin (Keratinocyte) 21648264
chr15 39501820 39502080 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21648265
chr15 39501825 39502115 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21648266
chr15 39501844 39501856 FOXC2 JASPAR yes 22865025
chr15 39501844 39501857 POU2F2 JASPAR yes 22865026
chr15 39501845 39501856 FOXB1 JASPAR yes 22865027
chr15 39501845 39501856 FOXC1 JASPAR yes 22865028
chr15 39501845 39501857 POU3F1 JASPAR yes 22865029
chr15 39501845 39501857 POU3F2 JASPAR yes 22865030
chr15 39501845 39501858 POU3F3 JASPAR yes 22865031
Genes associated with rs138539277[chr15:39501855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More