EnhancerDB
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  3. rs138544011[chr1:203496237]
Enhancers that have rs138544011[chr1:203496237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138544011[chr1:203496237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203495709 203496292 ZNF143 GTRD no Epithelial (MCF-7) 21369223
chr1 203495724 203496413 ZNF143 GTRD no Epithelial (MCF-7) 21369224
chr1 203495786 203496241 ZBTB33 GTRD no Brain (SK-N-SH) 21369227
chr1 203495811 203496341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369228
chr1 203495825 203496341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369229
chr1 203495879 203496245 ZNF274 GTRD no Cervix (HeLa-S3) 21369230
chr1 203496218 203496238 RREB1 JASPAR yes 34635755
chr1 203496220 203496240 RREB1 JASPAR yes 34635756
chr1 203496221 203496241 RREB1 JASPAR yes 34635757
chr1 203496228 203496238 SP1 JASPAR yes 34635758
chr1 203496228 203496238 ZNF740 JASPAR yes 34635759
chr1 203496229 203496239 ZNF740 JASPAR yes 34635760
chr1 203496229 203496249 RREB1 JASPAR yes 34635761
chr1 203496230 203496240 SP1 JASPAR yes 34635762
chr1 203496230 203496240 ZNF740 JASPAR yes 34635763
chr1 203496231 203496251 RREB1 JASPAR yes 34635764
chr1 203496232 203496242 ZNF740 JASPAR yes 34635765
chr1 203496232 203496246 PLAG1 JASPAR yes 34635766
chr1 203496233 203496253 RREB1 JASPAR yes 34635767
Genes associated with rs138544011[chr1:203496237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More