EnhancerDB
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  3. rs138597947[chr1:21642142]
Enhancers that have rs138597947[chr1:21642142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138597947[chr1:21642142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21642138 21642151 ZBTB18 JASPAR yes 27295068
chr1 21642139 21642151 PKNOX2 JASPAR yes 27295069
chr1 21642140 21642149 SNAI2 JASPAR yes 27295070
chr1 21642140 21642150 FIGLA JASPAR yes 27295071
chr1 21642140 21642150 ID4 JASPAR yes 27295072
chr1 21642140 21642150 TCF3 JASPAR yes 27295073
chr1 21642140 21642150 TCF4 JASPAR yes 27295074
chr1 21642142 21642151 ZEB1 JASPAR yes 27295075
Genes associated with rs138597947[chr1:21642142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More