EnhancerDB
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  3. rs138613484[chr1:28750942]
Enhancers that have rs138613484[chr1:28750942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs138613484[chr1:28750942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28750267 28752212 ZNF274 GTRD no Bone Marrow (K562) 107802660
chr1 28750938 28750951 ZBTB18 JASPAR yes 27769806
chr1 28750939 28750951 PKNOX1 JASPAR yes 27769807
chr1 28750939 28750951 TGIF1 JASPAR yes 27769808
chr1 28750940 28750949 SNAI2 JASPAR yes 27769809
chr1 28750940 28750950 FIGLA JASPAR yes 27769810
chr1 28750940 28750950 ID4 JASPAR yes 27769811
chr1 28750940 28750950 TCF3 JASPAR yes 27769812
chr1 28750940 28750950 TCF4 JASPAR yes 27769813
chr1 28750942 28750951 ZEB1 JASPAR yes 27769814
chr1 28750942 28750952 TBX21 JASPAR yes 27769815
Genes associated with rs138613484[chr1:28750942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More